Plant Genome DataBase Japan is a website with information on models and crop plants.Gramene has data on comparative functional genomics.EnsemblPlants with sequenced genomes of selected plants, viruses, metazoa, protists, fungi, and bacteria.NCBI genome database with over 400 plant genomes.Digital Plat atlas, which is a collection of atlases and handbooks.The toolkit for plant investigation is shared on the website and includes the following: The scientists hope the green robots can be used on construction sites, search for disaster survivors, and do archeological and environmental research. Once ready, the robot will have sensors and communication systems powered by biological batteries. The scientists observe various aspects of climbing plants and prepare mathematical models to replicate the plant decision-making process in response to environmental stimuli, understand communication pathways, and the growth of plants. GrowBot is a project which aims to develop light and low-volume robots that can anchor, negotiate voids, and climb inspired by climbing plants’ move-by-growing abilities. Cyanobacteria: synthetic biology tools such as plasmids, which McCormick Lab supplies.Plant phenotyping tools that contain image capture systems and software source code for morphology and growth of rosette-shaped plants.Plant Imaging data from various publications.The Lab shares its research software and tools for everyone to use through their website. The group uses Plant Engineering Biology principles that design, construct, and incorporate biological parts into microbes.įigure 2: “Image data of pyrenoids in Chlamydomonas and proto-pyrenoid condensates in higher plant chloroplasts,” Mccormick Lab. Vector graphics creation and manipulationĪlistair McCormick’s Lab at the Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, studies photosynthesis in micro-algae and higher plants using biochemical and physiological approaches. Word processor, spreadsheets, presentations Table 1: Free software that can help researchers. The free software, the application, the platforms, and the commercial software they replace are listed in Table 1. Though free, the software is top quality and comparable to commercial alternatives. These include software to help fresh and experienced ecological researchers in data entry, statistical analysis, literature review, writing, graphics, and communication. Penn State – Open Access Software for ScientistsĪ Penn State Department of Plant Science website reviews free software supported on many open science platforms. The 101 crop and plant models are classified depending on the model category, plant part, program, license, species, and model simulations. Information on fourteen species is included. The 31 data sets include images organized under plant part- plant, root system, single root, flower, leaf, fruit, pollen, and rosette see Figure 1. Other measurements include data analysis, visualization, count, curvature, and damage.įigure 1: Example of datasets provided by Quantitative. The 19 measurements include height, color, growth, diseases, angle, gravitropism, fluorescence, and anatomy. Plant parts analyzed are comprehensive and include the plant, canopy, cell, flower, leaf, root, fruit, seed, shoot, single, root, hypocotyl, and fungi. The 181 software tools are designed for different computer operating systems and could have three automation levels- fully automated, semi-automated, and manual. The developers of the software are from different universities around the world. The website groups the tools into image software, image datasets, and plant crop models. You can revoke your consent to receive emails at any time by using the SafeUnsubscribe® link, found at the bottom of every email. By submitting this form, you are consenting to receive marketing emails from.
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